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MueLu
Version of the Day
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Factory to export aggregation info or visualize aggregates using VTK. More...
#include <MueLu_AggregationExportFactory_fwd.hpp>
Public Member Functions | |
| RCP< const ParameterList > | GetValidParameterList () const |
| Return a const parameter list of valid parameters that setParameterList() will accept. More... | |
Public Member Functions inherited from MueLu::TwoLevelFactoryBase | |
| TwoLevelFactoryBase () | |
| Constructor. More... | |
| virtual | ~TwoLevelFactoryBase () |
| Destructor. More... | |
| virtual void | CallDeclareInput (Level &requestedLevel) const |
| virtual void | CallBuild (Level &requestedLevel) const |
Public Member Functions inherited from MueLu::Factory | |
| void | EnableMultipleCallCheck () const |
| void | DisableMultipleCallCheck () const |
| void | ResetDebugData () const |
| Factory () | |
| Constructor. More... | |
| virtual | ~Factory () |
| Destructor. More... | |
| virtual void | SetFactory (const std::string &varName, const RCP< const FactoryBase > &factory) |
| Configuration. More... | |
| const RCP< const FactoryBase > | GetFactory (const std::string &varName) const |
| Default implementation of FactoryAcceptor::GetFactory() More... | |
| RCP< ParameterList > | RemoveFactoriesFromList (const ParameterList &list) const |
Public Member Functions inherited from MueLu::FactoryBase | |
| FactoryBase () | |
| Constructor. More... | |
| virtual | ~FactoryBase () |
| Destructor. More... | |
| int | GetID () const |
| return unique factory id More... | |
Public Member Functions inherited from MueLu::BaseClass | |
| virtual | ~BaseClass () |
| Destructor. More... | |
Public Member Functions inherited from MueLu::VerboseObject | |
| VerbLevel | GetVerbLevel () const |
| Get the verbosity level. More... | |
| void | SetVerbLevel (const VerbLevel verbLevel) |
| Set the verbosity level of this object. More... | |
| int | GetProcRankVerbose () const |
| Get proc rank used for printing. Do not use this information for any other purpose. More... | |
| int | SetProcRankVerbose (int procRank) const |
| Set proc rank used for printing. More... | |
| bool | IsPrint (MsgType type, int thisProcRankOnly=-1) const |
| Find out whether we need to print out information for a specific message type. More... | |
| Teuchos::FancyOStream & | GetOStream (MsgType type, int thisProcRankOnly=0) const |
| Get an output stream for outputting the input message type. More... | |
| Teuchos::FancyOStream & | GetBlackHole () const |
| VerboseObject () | |
| virtual | ~VerboseObject () |
| Destructor. More... | |
Public Member Functions inherited from MueLu::Describable | |
| virtual | ~Describable () |
| Destructor. More... | |
| virtual std::string | ShortClassName () const |
| Return the class name of the object, without template parameters and without namespace. More... | |
| virtual void | describe (Teuchos::FancyOStream &out_arg, const VerbLevel verbLevel=Default) const |
| virtual std::string | description () const |
| Return a simple one-line description of this object. More... | |
| void | describe (Teuchos::FancyOStream &out, const Teuchos::EVerbosityLevel verbLevel=Teuchos::Describable::verbLevel_default) const |
| Print the object with some verbosity level to an FancyOStream object. More... | |
Public Member Functions inherited from MueLu::FactoryAcceptor | |
| virtual | ~FactoryAcceptor () |
Public Member Functions inherited from MueLu::ParameterListAcceptorImpl | |
| ParameterListAcceptorImpl () | |
| virtual | ~ParameterListAcceptorImpl ()=default |
| virtual void | SetParameterList (const Teuchos::ParameterList ¶mList) |
| Set parameters from a parameter list and return with default values. More... | |
| virtual const Teuchos::ParameterList & | GetParameterList () const |
| void | SetParameter (const std::string &name, const ParameterEntry &entry) |
| Set a parameter directly as a ParameterEntry. More... | |
| const ParameterEntry & | GetParameter (const std::string &name) const |
| Retrieves a const entry with the name name. More... | |
| virtual void | GetDocumentation (std::ostream &os) const |
Public Member Functions inherited from MueLu::ParameterListAcceptor | |
| ParameterListAcceptor () | |
| virtual | ~ParameterListAcceptor ()=default |
Public Member Functions inherited from MueLu::VisualizationHelpers< Scalar, LocalOrdinal, GlobalOrdinal, Node > | |
| RCP< ParameterList > | GetValidParameterList () const |
| VisualizationHelpers () | |
| Constructor. More... | |
| virtual | ~VisualizationHelpers () |
| Destructor. More... | |
Private Member Functions | |
| void | doJacksPlus_ (std::vector< int > &vertices, std::vector< int > &geomSizes) const |
| void | doConvexHulls (std::vector< int > &vertices, std::vector< int > &geomSizes) const |
| void | doAlphaHulls_ (std::vector< int > &vertices, std::vector< int > &geomSizes) const |
| void | doAlphaHulls2D_ (std::vector< int > &vertices, std::vector< int > &geomSizes) const |
| void | doAlphaHulls3D_ (std::vector< int > &vertices, std::vector< int > &geomSizes) const |
| void | doGraphEdges_ (std::ofstream &fout, Teuchos::RCP< Matrix > &A, Teuchos::RCP< GraphBase > &G, bool fine, int dofs) const |
| void | writeFile_ (std::ofstream &fout, std::string styleName, std::vector< int > &vertices, std::vector< int > &geomSizes) const |
| void | buildColormap_ () const |
| void | writePVTU_ (std::ofstream &pvtu, std::string baseFname, int numProcs) const |
Private Attributes | |
| Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > | xCoords_ |
| Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > | yCoords_ |
| Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > | zCoords_ |
| Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > | cx_ |
| Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > | cy_ |
| Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > | cz_ |
| Teuchos::ArrayRCP< LocalOrdinal > | vertex2AggId_ |
| Teuchos::ArrayRCP< LocalOrdinal > | aggSizes_ |
| std::vector< bool > | isRoot_ |
| bool | doFineGraphEdges_ |
| bool | doCoarseGraphEdges_ |
| int | numNodes_ |
| int | numAggs_ |
| int | dims_ |
| int | myRank_ |
| Teuchos::RCP< const Map > | nodeMap_ |
| Teuchos::RCP< const Map > | nodeMapCoarse_ |
| int | aggsOffset_ |
Static Private Attributes | |
| static const int | CONTRAST_1_ = -1 |
| static const int | CONTRAST_2_ = -2 |
| static const int | CONTRAST_3_ = -3 |
Constructors/Destructors. | |
| AggregationExportFactory () | |
| Constructor. More... | |
| virtual | ~AggregationExportFactory () |
| Destructor. More... | |
| void | DeclareInput (Level &fineLevel, Level &coarseLevel) const |
| Input. More... | |
Build methods. | |
| void | Build (Level &fineLevel, Level &coarseLevel) const |
| Build an object with this factory. More... | |
Additional Inherited Members | |
Static Public Member Functions inherited from MueLu::Factory | |
| static void | EnableTimerSync () |
| static void | DisableTimerSync () |
| static void | EnableMultipleCheckGlobally () |
| static void | DisableMultipleCheckGlobally () |
Static Public Member Functions inherited from MueLu::VerboseObject | |
| static void | SetMueLuOStream (const Teuchos::RCP< Teuchos::FancyOStream > &mueluOStream) |
| static void | SetMueLuOFileStream (const std::string &filename) |
| static Teuchos::RCP< Teuchos::FancyOStream > | GetMueLuOStream () |
| static void | SetDefaultVerbLevel (const VerbLevel defaultVerbLevel) |
| Set the default (global) verbosity level. More... | |
| static VerbLevel | GetDefaultVerbLevel () |
| Get the default (global) verbosity level. More... | |
Protected Member Functions inherited from MueLu::Factory | |
| void | Input (Level &level, const std::string &varName) const |
| void | Input (Level &level, const std::string &varName, const std::string &varParamName) const |
| template<class T > | |
| T | Get (Level &level, const std::string &varName) const |
| template<class T > | |
| T | Get (Level &level, const std::string &varName, const std::string &varParamName) const |
| template<class T > | |
| void | Set (Level &level, const std::string &varName, const T &data) const |
| bool | IsAvailable (Level &level, const std::string &varName) const |
Protected Member Functions inherited from MueLu::VisualizationHelpers< Scalar, LocalOrdinal, GlobalOrdinal, Node > | |
| void | writeFileVTKOpening (std::ofstream &fout, std::vector< int > &uniqueFine, std::vector< int > &geomSizesFine) const |
| void | writeFileVTKNodes (std::ofstream &fout, std::vector< int > &uniqueFine, Teuchos::RCP< const Map > &nodeMap) const |
| void | writeFileVTKData (std::ofstream &fout, std::vector< int > &uniqueFine, LocalOrdinal myAggOffset, ArrayRCP< LocalOrdinal > &vertex2AggId, int myRank) const |
| void | writeFileVTKCoordinates (std::ofstream &fout, std::vector< int > &uniqueFine, Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > &fx, Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > &fy, Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > &fz, int dim) const |
| void | writeFileVTKCells (std::ofstream &fout, std::vector< int > &uniqueFine, std::vector< LocalOrdinal > &vertices, std::vector< LocalOrdinal > &geomSize) const |
| void | writeFileVTKClosing (std::ofstream &fout) const |
| void | writePVTU (std::ofstream &pvtu, std::string baseFname, int numProcs, bool bFineEdges=false, bool bCoarseEdges=false) const |
| void | buildColormap () const |
| std::string | getFileName (int numProcs, int myRank, int level, const Teuchos::ParameterList &pL) const |
| std::string | getBaseFileName (int numProcs, int level, const Teuchos::ParameterList &pL) const |
| std::string | getPVTUFileName (int numProcs, int myRank, int level, const Teuchos::ParameterList &pL) const |
| std::string | replaceAll (std::string result, const std::string &replaceWhat, const std::string &replaceWithWhat) const |
| std::vector< int > | makeUnique (std::vector< int > &vertices) const |
| replaces node indices in vertices with compressed unique indices, and returns list of unique points More... | |
Static Protected Member Functions inherited from MueLu::VisualizationHelpers< Scalar, LocalOrdinal, GlobalOrdinal, Node > | |
| static void | doPointCloud (std::vector< int > &vertices, std::vector< int > &geomSizes, LO numLocalAggs, LO numFineNodes) |
| static void | doJacks (std::vector< int > &vertices, std::vector< int > &geomSizes, LO numLocalAggs, LO numFineNodes, const std::vector< bool > &isRoot, const ArrayRCP< LO > &vertex2AggId) |
| static void | doConvexHulls2D (std::vector< int > &vertices, std::vector< int > &geomSizes, LO numLocalAggs, LO numFineNodes, const std::vector< bool > &isRoot, const ArrayRCP< LO > &vertex2AggId, const Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > &xCoords, const Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > &yCoords) |
| static void | doConvexHulls3D (std::vector< int > &vertices, std::vector< int > &geomSizes, LO numLocalAggs, LO numFineNodes, const std::vector< bool > &isRoot, const ArrayRCP< LO > &vertex2AggId, const Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > &xCoords, const Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > &yCoords, const Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > &zCoords) |
| static void | doCGALConvexHulls2D (std::vector< int > &vertices, std::vector< int > &geomSizes, LO numLocalAggs, LO numFineNodes, const std::vector< bool > &isRoot, const ArrayRCP< LO > &vertex2AggId, const Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > &xCoords, const Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > &yCoords) |
| static void | doCGALConvexHulls3D (std::vector< int > &vertices, std::vector< int > &geomSizes, LO numLocalAggs, LO numFineNodes, const std::vector< bool > &isRoot, const ArrayRCP< LO > &vertex2AggId, const Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > &xCoords, const Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > &yCoords, const Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > &zCoords) |
| static void | doGraphEdges (std::vector< int > &vertices, std::vector< int > &geomSizes, Teuchos::RCP< GraphBase > &G, Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > &fx, Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > &fy, Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > &fz) |
| static int | ccw (const myVec2 &a, const myVec2 &b, const myVec2 &c) |
| static myVec3 | crossProduct (myVec3 v1, myVec3 v2) |
| static double | dotProduct (myVec2 v1, myVec2 v2) |
| static double | dotProduct (myVec3 v1, myVec3 v2) |
| static bool | isInFront (myVec3 point, myVec3 inPlane, myVec3 n) |
| static double | mymagnitude (myVec2 vec) |
| static double | mymagnitude (myVec3 vec) |
| static double | distance (myVec2 p1, myVec2 p2) |
| static double | distance (myVec3 p1, myVec3 p2) |
| static myVec2 | vecSubtract (myVec2 v1, myVec2 v2) |
| static myVec3 | vecSubtract (myVec3 v1, myVec3 v2) |
| static myVec2 | getNorm (myVec2 v) |
| static myVec3 | getNorm (myVec3 v1, myVec3 v2, myVec3 v3) |
| static double | pointDistFromTri (myVec3 point, myVec3 v1, myVec3 v2, myVec3 v3) |
| static std::vector< myTriangle > | processTriangle (std::list< myTriangle > &tris, myTriangle tri, std::list< int > &pointsInFront, myVec3 &barycenter, const Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > &xCoords, const Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > &yCoords, const Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > &zCoords) |
| static std::vector< int > | giftWrap (std::vector< myVec2 > &points, std::vector< int > &nodes, const Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > &xCoords, const Teuchos::ArrayRCP< const typename Teuchos::ScalarTraits< Scalar >::coordinateType > &yCoords) |
Static Protected Attributes inherited from MueLu::Factory | |
| static bool | timerSync_ = false |
Factory to export aggregation info or visualize aggregates using VTK.
Note, that some routines only work for 1 dof per node.
| Parameter | type | default | master.xml | validated | requested | description |
|---|---|---|---|---|---|---|
| aggregation: output filename | string | * | filename for VTK-style visualization output | |||
| aggregation: output file: time step | int | 0 | * | time step (overwrites 'TIMESTEP' in output file name) | ||
| aggregation: output file: iter | int | 0 | * | nonlinear iteration (overwrites 'ITER' in output file name) | ||
| aggregation: output file: agg style | string | Point Cloud | * | style of aggregation visualization for VTK output. Can be either "Point Cloud", "Jacks", "Convex Hulls" or "Alpha Hulls" | ||
| aggregation: output file: fine graph edges | bool | false | * | Draw fine node connections in VTK output (only works for 1 dofs per node!) | ||
| aggregation: output file: build colormap | bool | false | * | Output a random color map for paraView in a separate xml file. | ||
| Output filename | string | * | Output file name for aggregation data export (outdated, do not use) | |||
| Output file: time step | int | 0 | * | time step variable for output filename (outdated, do not use) | ||
| Output file: iter | int | 0 | * | nonlinear iteration variable for output filename (outdated, do not use) | ||
| A | Factory | Teuchos::null | * | * | Factory for A | |
| Coordinates | Factory | Teuchos::null | * | * | Factory for Coordinates (only necessary for vtk output) | |
| Graph | Factory | Teuchos::null | * | * | Factory for Graph of A (only necessary for vtk output) | |
| Aggregates | Factory | Teuchos::null | * | * | Factory for Aggregates | |
| UnAmalgamationInfo | Factory | Teuchos::null | * | * | Factory for UnAmalgamationInfo | |
| DofsPerNode | Factory | Teuchos::null | * | * | Factory for DofsPerNode |
The * in the master.xml column denotes that the parameter is defined in the master.xml file.
The * in the validated column means that the parameter is declared in the list of valid input parameters (see AggregationExportFactory::GetValidParameters).
The * in the requested column states that the data is requested as input with all dependencies (see AggregationExportFactory::DeclareInput).
Definition at line 54 of file MueLu_AggregationExportFactory_fwd.hpp.
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Constructor.
Definition at line 120 of file MueLu_AggregationExportFactory_decl.hpp.
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Destructor.
Definition at line 131 of file MueLu_AggregationExportFactory_decl.hpp.
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Return a const parameter list of valid parameters that setParameterList() will accept.
Also define the default values of parameters according to the input parameter list.
Reimplemented from MueLu::Factory.
Definition at line 88 of file MueLu_AggregationExportFactory_def.hpp.
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Input.
Implements MueLu::TwoLevelFactoryBase.
Definition at line 118 of file MueLu_AggregationExportFactory_def.hpp.
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Build an object with this factory.
Implements MueLu::TwoLevelFactoryBase.
Definition at line 140 of file MueLu_AggregationExportFactory_def.hpp.
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Definition at line 371 of file MueLu_AggregationExportFactory_def.hpp.
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Definition at line 377 of file MueLu_AggregationExportFactory_def.hpp.
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Definition at line 387 of file MueLu_AggregationExportFactory_def.hpp.
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Definition at line 397 of file MueLu_AggregationExportFactory_def.hpp.
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Definition at line 457 of file MueLu_AggregationExportFactory_def.hpp.
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Definition at line 552 of file MueLu_AggregationExportFactory_def.hpp.
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Definition at line 817 of file MueLu_AggregationExportFactory_def.hpp.
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Definition at line 937 of file MueLu_AggregationExportFactory_def.hpp.
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Definition at line 964 of file MueLu_AggregationExportFactory_def.hpp.
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Definition at line 167 of file MueLu_AggregationExportFactory_decl.hpp.
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Definition at line 168 of file MueLu_AggregationExportFactory_decl.hpp.
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Definition at line 169 of file MueLu_AggregationExportFactory_decl.hpp.
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Definition at line 172 of file MueLu_AggregationExportFactory_decl.hpp.
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Definition at line 173 of file MueLu_AggregationExportFactory_decl.hpp.
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Definition at line 174 of file MueLu_AggregationExportFactory_decl.hpp.
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Definition at line 175 of file MueLu_AggregationExportFactory_decl.hpp.
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Definition at line 176 of file MueLu_AggregationExportFactory_decl.hpp.
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Definition at line 177 of file MueLu_AggregationExportFactory_decl.hpp.
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Definition at line 178 of file MueLu_AggregationExportFactory_decl.hpp.
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Definition at line 179 of file MueLu_AggregationExportFactory_decl.hpp.
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Definition at line 180 of file MueLu_AggregationExportFactory_decl.hpp.
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Definition at line 181 of file MueLu_AggregationExportFactory_decl.hpp.
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Definition at line 182 of file MueLu_AggregationExportFactory_decl.hpp.
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Definition at line 183 of file MueLu_AggregationExportFactory_decl.hpp.
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Definition at line 184 of file MueLu_AggregationExportFactory_decl.hpp.
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Definition at line 185 of file MueLu_AggregationExportFactory_decl.hpp.
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Definition at line 186 of file MueLu_AggregationExportFactory_decl.hpp.
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Definition at line 187 of file MueLu_AggregationExportFactory_decl.hpp.
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Definition at line 188 of file MueLu_AggregationExportFactory_decl.hpp.
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Definition at line 189 of file MueLu_AggregationExportFactory_decl.hpp.